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FigShare changes all '-' to '_' in filenames

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This commit is contained in:
Chris Kerr
2014-11-08 11:26:43 +00:00
parent 6973fc4e5c
commit ae2b263989
2 changed files with 24 additions and 23 deletions
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46
tests/test_BioLogic.py
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@@ -15,7 +15,7 @@ testdata_dir = os.path.join(os.path.dirname(__file__), 'testdata')
def test_open_MPT():
mpt1, comments = MPTfile(os.path.join(testdata_dir, 'bio-logic1.mpt'))
mpt1, comments = MPTfile(os.path.join(testdata_dir, 'bio_logic1.mpt'))
eq_(comments, [])
eq_(mpt1.dtype.names, ("mode", "ox/red", "error", "control changes",
"Ns changes", "counter inc.", "time/s",
@@ -25,11 +25,11 @@ def test_open_MPT():
@raises(ValueError)
def test_open_MPT_fails_for_bad_file():
mpt1 = MPTfile(os.path.join(testdata_dir, 'bio-logic1.mpr'))
mpt1 = MPTfile(os.path.join(testdata_dir, 'bio_logic1.mpr'))
def test_open_MPT_csv():
mpt1, comments = MPTfileCSV(os.path.join(testdata_dir, 'bio-logic1.mpt'))
mpt1, comments = MPTfileCSV(os.path.join(testdata_dir, 'bio_logic1.mpt'))
eq_(comments, [])
eq_(mpt1.fieldnames, ["mode", "ox/red", "error", "control changes",
"Ns changes", "counter inc.", "time/s",
@@ -39,46 +39,46 @@ def test_open_MPT_csv():
@raises(ValueError)
def test_open_MPT_csv_fails_for_bad_file():
mpt1 = MPTfileCSV(os.path.join(testdata_dir, 'bio-logic1.mpr'))
mpt1 = MPTfileCSV(os.path.join(testdata_dir, 'bio_logic1.mpr'))
def test_open_MPR1():
mpr1 = MPRfile(os.path.join(testdata_dir, 'bio-logic1.mpr'))
mpr1 = MPRfile(os.path.join(testdata_dir, 'bio_logic1.mpr'))
## Check the dates as a basic test that it has been read properly
eq_(mpr1.startdate, date(2011, 10, 29))
eq_(mpr1.enddate, date(2011, 10, 31))
def test_open_MPR2():
mpr2 = MPRfile(os.path.join(testdata_dir, 'bio-logic2.mpr'))
mpr2 = MPRfile(os.path.join(testdata_dir, 'bio_logic2.mpr'))
## Check the dates as a basic test that it has been read properly
eq_(mpr2.startdate, date(2012, 9, 27))
eq_(mpr2.enddate, date(2012, 9, 27))
def test_open_MPR3():
mpr = MPRfile(os.path.join(testdata_dir, 'bio-logic3.mpr'))
mpr = MPRfile(os.path.join(testdata_dir, 'bio_logic3.mpr'))
## Check the dates as a basic test that it has been read properly
eq_(mpr.startdate, date(2013, 3, 27))
eq_(mpr.enddate, date(2013, 3, 27))
def test_open_MPR4():
mpr = MPRfile(os.path.join(testdata_dir, 'bio-logic4.mpr'))
mpr = MPRfile(os.path.join(testdata_dir, 'bio_logic4.mpr'))
## Check the dates as a basic test that it has been read properly
eq_(mpr.startdate, date(2011, 11, 1))
eq_(mpr.enddate, date(2011, 11, 2))
def test_open_MPR5():
mpr = MPRfile(os.path.join(testdata_dir, 'bio-logic5.mpr'))
mpr = MPRfile(os.path.join(testdata_dir, 'bio_logic5.mpr'))
## Check the dates as a basic test that it has been read properly
eq_(mpr.startdate, date(2013, 1, 28))
eq_(mpr.enddate, date(2013, 1, 28))
def test_open_MPR6():
mpr = MPRfile(os.path.join(testdata_dir, 'bio-logic6.mpr'))
mpr = MPRfile(os.path.join(testdata_dir, 'bio_logic6.mpr'))
## Check the dates as a basic test that it has been read properly
eq_(mpr.startdate, date(2012, 9, 11))
## no end date because no VMP LOG module
@@ -145,37 +145,37 @@ def assert_MPR_matches_MPT(mpr, mpt, comments):
def test_MPR1_matches_MPT1():
mpr1 = MPRfile(os.path.join(testdata_dir, 'bio-logic1.mpr'))
mpt1, comments = MPTfile(os.path.join(testdata_dir, 'bio-logic1.mpt'))
mpr1 = MPRfile(os.path.join(testdata_dir, 'bio_logic1.mpr'))
mpt1, comments = MPTfile(os.path.join(testdata_dir, 'bio_logic1.mpt'))
assert_MPR_matches_MPT(mpr1, mpt1, comments)
def test_MPR2_matches_MPT2():
mpr2 = MPRfile(os.path.join(testdata_dir, 'bio-logic2.mpr'))
mpt2, comments = MPTfile(os.path.join(testdata_dir, 'bio-logic2.mpt'))
mpr2 = MPRfile(os.path.join(testdata_dir, 'bio_logic2.mpr'))
mpt2, comments = MPTfile(os.path.join(testdata_dir, 'bio_logic2.mpt'))
assert_MPR_matches_MPT(mpr2, mpt2, comments)
## No bio-logic3.mpt file
## No bio_logic3.mpt file
def test_MPR4_matches_MPT4():
mpr4 = MPRfile(os.path.join(testdata_dir, 'bio-logic4.mpr'))
mpt4, comments = MPTfile(os.path.join(testdata_dir, 'bio-logic4.mpt'))
mpr4 = MPRfile(os.path.join(testdata_dir, 'bio_logic4.mpr'))
mpt4, comments = MPTfile(os.path.join(testdata_dir, 'bio_logic4.mpt'))
assert_MPR_matches_MPT(mpr4, mpt4, comments)
def test_MPR5_matches_MPT5():
mpr = MPRfile(os.path.join(testdata_dir, 'bio-logic5.mpr'))
mpr = MPRfile(os.path.join(testdata_dir, 'bio_logic5.mpr'))
mpt, comments = MPTfile((re.sub(b'\tXXX\t', b'\t0\t', line) for line in
open(os.path.join(testdata_dir, 'bio-logic5.mpt'),
open(os.path.join(testdata_dir, 'bio_logic5.mpt'),
mode='rb')))
assert_MPR_matches_MPT(mpr, mpt, comments)
def test_MPR6_matches_MPT6():
mpr = MPRfile(os.path.join(testdata_dir, 'bio-logic6.mpr'))
mpt, comments = MPTfile(os.path.join(testdata_dir, 'bio-logic6.mpt'))
mpr = MPRfile(os.path.join(testdata_dir, 'bio_logic6.mpr'))
mpt, comments = MPTfile(os.path.join(testdata_dir, 'bio_logic6.mpt'))
mpr.data = mpr.data[:958] # .mpt file is incomplete
assert_MPR_matches_MPT(mpr, mpt, comments)
@@ -190,6 +190,6 @@ def test_CV_C01():
def test_CA_455nm():
mpr = MPRfile(os.path.join(testdata_dir, '121-CA-455nm-6V_30min_C01.mpr'))
mpt, comments = MPTfile(os.path.join(testdata_dir, '121-CA-455nm-6V_30min_C01.mpt'))
mpr = MPRfile(os.path.join(testdata_dir, '121_CA_455nm_6V_30min_C01.mpr'))
mpt, comments = MPTfile(os.path.join(testdata_dir, '121_CA_455nm_6V_30min_C01.mpt'))
assert_MPR_matches_MPT(mpr, mpt, comments)