mirror of
https://github.com/echemdata/galvani.git
synced 2025-12-14 01:15:34 +00:00
Remove compability code for Python 2 subprocess module
This commit is contained in:
@@ -371,27 +371,28 @@ def mdb_get_data_text(s3db, filename, table):
|
||||
r'INSERT INTO "\w+" \([^)]+?\) VALUES \(("[^"]*"|[^")])+?\);\n',
|
||||
re.IGNORECASE
|
||||
)
|
||||
# TODO after dropping Python 2 support - use Popen as contextmanager
|
||||
try:
|
||||
mdb_sql = sp.Popen(['mdb-export', '-I', 'postgres', filename, table],
|
||||
bufsize=-1, stdin=None, stdout=sp.PIPE,
|
||||
universal_newlines=True)
|
||||
# Initialize values to avoid NameError in except clause
|
||||
mdb_output = ''
|
||||
insert_match = None
|
||||
with sp.Popen(['mdb-export', '-I', 'postgres', filename, table],
|
||||
bufsize=-1, stdin=sp.DEVNULL, stdout=sp.PIPE,
|
||||
universal_newlines=True) as mdb_sql:
|
||||
|
||||
mdb_output = mdb_sql.stdout.read()
|
||||
while len(mdb_output) > 0:
|
||||
insert_match = insert_pattern.match(mdb_output)
|
||||
s3db.execute(insert_match.group())
|
||||
mdb_output = mdb_output[insert_match.end():]
|
||||
mdb_output += mdb_sql.stdout.read()
|
||||
s3db.commit()
|
||||
|
||||
except OSError as e:
|
||||
if e.errno == 2:
|
||||
raise RuntimeError('Could not locate the `mdb-export` executable. '
|
||||
'Check that mdbtools is properly installed.')
|
||||
else:
|
||||
raise
|
||||
try:
|
||||
# Initialize values to avoid NameError in except clause
|
||||
mdb_output = ''
|
||||
insert_match = None
|
||||
mdb_output = mdb_sql.stdout.read()
|
||||
while len(mdb_output) > 0:
|
||||
insert_match = insert_pattern.match(mdb_output)
|
||||
s3db.execute(insert_match.group())
|
||||
mdb_output = mdb_output[insert_match.end():]
|
||||
s3db.commit()
|
||||
except BaseException:
|
||||
print("Error while importing %s" % table)
|
||||
if mdb_output:
|
||||
@@ -399,38 +400,32 @@ def mdb_get_data_text(s3db, filename, table):
|
||||
if insert_match:
|
||||
print("insert_re match:", insert_match)
|
||||
raise
|
||||
finally:
|
||||
mdb_sql.terminate()
|
||||
|
||||
|
||||
def mdb_get_data_numeric(s3db, filename, table):
|
||||
print("Reading %s..." % table)
|
||||
# TODO after dropping Python 2 support - use Popen as contextmanager
|
||||
try:
|
||||
mdb_sql = sp.Popen(['mdb-export', filename, table],
|
||||
bufsize=-1, stdin=None, stdout=sp.PIPE,
|
||||
universal_newlines=True)
|
||||
with sp.Popen(['mdb-export', filename, table],
|
||||
bufsize=-1, stdin=sp.DEVNULL, stdout=sp.PIPE,
|
||||
universal_newlines=True) as mdb_sql:
|
||||
mdb_csv = csv.reader(mdb_sql.stdout)
|
||||
mdb_headers = next(mdb_csv)
|
||||
quoted_headers = ['"%s"' % h for h in mdb_headers]
|
||||
joined_headers = ', '.join(quoted_headers)
|
||||
joined_placemarks = ', '.join(['?' for h in mdb_headers])
|
||||
insert_stmt = 'INSERT INTO "{0}" ({1}) VALUES ({2});'.format(
|
||||
table,
|
||||
joined_headers,
|
||||
joined_placemarks,
|
||||
)
|
||||
s3db.executemany(insert_stmt, mdb_csv)
|
||||
s3db.commit()
|
||||
except OSError as e:
|
||||
if e.errno == 2:
|
||||
raise RuntimeError('Could not locate the `mdb-export` executable. '
|
||||
'Check that mdbtools is properly installed.')
|
||||
else:
|
||||
raise
|
||||
try:
|
||||
mdb_csv = csv.reader(mdb_sql.stdout)
|
||||
mdb_headers = next(mdb_csv)
|
||||
quoted_headers = ['"%s"' % h for h in mdb_headers]
|
||||
joined_headers = ', '.join(quoted_headers)
|
||||
joined_placemarks = ', '.join(['?' for h in mdb_headers])
|
||||
insert_stmt = 'INSERT INTO "{0}" ({1}) VALUES ({2});'.format(
|
||||
table,
|
||||
joined_headers,
|
||||
joined_placemarks,
|
||||
)
|
||||
s3db.executemany(insert_stmt, mdb_csv)
|
||||
s3db.commit()
|
||||
finally:
|
||||
mdb_sql.terminate()
|
||||
|
||||
|
||||
def mdb_get_data(s3db, filename, table):
|
||||
|
||||
@@ -9,8 +9,8 @@ import pytest
|
||||
from galvani import res2sqlite
|
||||
|
||||
|
||||
# TODO - change to subprocess.DEVNULL when python 2 support is removed
|
||||
have_mdbtools = (subprocess.call(['which', 'mdb-export'], stdout=None) == 0)
|
||||
have_mdbtools = (subprocess.call(['which', 'mdb-export'],
|
||||
stdout=subprocess.DEVNULL) == 0)
|
||||
|
||||
|
||||
def test_res2sqlite_help():
|
||||
|
||||
Reference in New Issue
Block a user